rs224599213 SNP Detail

Summary

• ID
  rs224599213
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr5:135870252 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGCAAGCCC CAGCACAGGA
  GAAAAAACTG TGTAGGAAAT GGAGCGGGCT GAATTGGAGA AATGGCAAAG GGTAGCCCAG
  TGCTCTGCCT GACAATGTAC TCAGCAAATC CTACAGGACA CATTCAGAGG GTGTCCACCT
  CGCTGACGAA CTCTTCCCCA GTCAGCACTG AGGCTGTGAG AGAAGCTGGA GTAAGACTCC
  Y
  GGCCTTTCTC TCAGCCGTGG GCCCTGCTCA GCAGCAGACA CCTTCCTGAA TCTCCAGACT
  TCTGTCCACT TTTGTTTCAC AAAAACCTAA TCAATGATTT TAGCTTCAGA GACAGGAAGA
  TTGTTATGCT ACACAGTGAG TTCAAGACCA ACCTGGGATA TACAAAAAGA CTCTGTCTCA
  ATCAAAAGAA AACACTCTCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321697845	CHEV_5_136317268	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224599213					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:135870252 () rs orientation: forward

Symbol	Name	Function Class
Srrm3	serine/arginine repetitive matrix 3	Intron
Srrm3os	serine/arginine repetitive matrix 3, opposite strand	1659 bp downstream