rs224652649 SNP Detail

Summary

• ID
  rs224652649
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:61761908 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    cttagctac catgtctgcc tacctgcctg
  cctgcctgct gccatgctct cctgccatga ggataatggg ctcaaactct gaaactgtaa
  gccagcccca attaagtgct ttccttgtaa gagttgctgt gctcatggtg tctcttcaca
  R
  caatagaaca cagactaaga caTCGGTCAT TGCAGCTTTC TGCTGAAGAG CGTACACACG
  ACTCTTTCTA CTGTCGATCA GCAGGGACTG GCATGGGAGA CAAGATCTGG CACTTGAGTC
  ACCTGGGGTT AGAGCTCTTT CTTGACTTCC                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323330213	CHEV_10_61388877	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224652649					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:61761908 () rs orientation: forward

Symbol	Name	Function Class
Col13a1	collagen, type XIII, alpha 1	within coordinates
Gm30121	predicted gene, 30121	within coordinates
Rr223137	regulatory region 223137	129 bp distal