rs224703439 SNP Detail

Summary

• ID
  rs224703439
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:56266020 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTGCTCCCC ACCCTGGGAG CCTATCTGAA
  TCTGCCTGGT GCTAGAACTA GTAGCTGTCT CAGGCTCCCC TTTTTCAGGG AATATTAAGC
  TACTAGTCAT TCAGATATTC ACAGATCAGA ACATAGCACA TAGACATAGC CTCTCTCCTG
  M
  CACCTACTGA CGCGCATGTG ACACAGCAGT CACAACTGCA AGGCCTCTGG GGGAAGGGGC
  TTCAGGTTTC TAAGCCCACC TTGCTGCTTC TCTTTCTCCT TCCTTCTCCC CTCCTGTCAC
  CCACTCTGAG ACCTGGGTTT TCTCACACAC                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325856842	CHEV_19_56352078	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224703439					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:56266020 () rs orientation: forward

Symbol	Name	Function Class
Gm22271	predicted gene, 22271	within coordinates
Gm32257	predicted gene, 32257	within coordinates
Rr549993	regulatory region 549993	215 bp distal
Rr549994	regulatory region 549994	within coordinates
Rr549995	regulatory region 549995	414 bp proximal
Rr549996	regulatory region 549996	440 bp proximal
Rr549997	regulatory region 549997	504 bp proximal