rs224760807 SNP Detail

Summary

• ID
  rs224760807
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:66055493 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTAACTTTC AGATTCATAG
  TCAGGATGAT TGCCTGGCAA TACTTAAGAC AATTTGAATT TTAGTTCAGG GGCATCTGTC
  ATAGGGTCCA GTTGCTAAAG CAGGTCAAAC CAAAGAGAGC TTACCTGTTG CTTGGACAGA
  CACACTACAT TTCTCTGTTT TTTTCCTGTT CTGAGTGCCA TTGAATTCTG CTCTTACCAT
  C
  ATGTTTTTCT CCTGTCTGCT GGGTTTTGCA CTTTGTAGAC AGCCCTAGAC CTTCAGAGGC
  CTTCTCTGAG ATTTGCTACT CCATGGGAAG TTTCTCCTTG TGGAACTTTT CTTCTGGCAT
  AGCTTCTGAG CAGCCTCCCT GCATCTCACA TTCCTCCCCA CCCCCCACCC CACCCCCCTT
  TGTTCTTTTT GACACTAGGG                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325658623	CHEV_18_66082076	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224760807					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:66055493 () rs orientation: forward

Symbol	Name	Function Class
Gm50118	predicted gene, 50118	54 bp downstream
Gm50119	predicted gene, 50119	1634 bp downstream
Gm58551	predicted gene, 58551	739 bp upstream
Rr346799	regulatory region 346799	within coordinates
Rr346800	regulatory region 346800	1908 bp proximal
Rr353052	regulatory region 353052	92 bp distal
Rr393825	regulatory region 393825	1791 bp upstream