rs224789490 SNP Detail

Summary

• ID
  rs224789490
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr8:13334621 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTTTGGAAC TAGATGGGGT
  GGTGTGCACA GTACTGGGAC CACACTAATC ACTATAAACT TGTACCCTAA AAGAAAACTT
  CAGGATAGCA AGCAAGAACC TCCAGGTCTA CCCACCGGAT AGGTCTCTGG AGCAGCCACA
  CTATTATTAT TATTATTATT ATTATTATTA TTGACAAGCG TAACACCACA GAGTGCTGCA
  M
  GTCAAGACAC TGTAGACATA CTCCTGAAGT CAGGATGACG CCTGGGTCTG AGCCATATAA
  CTCCTAAAGT CACCCTCCAC CCCCAGTGTA TGACAACTTA GCTTCACTTA CTGCAAAGAG
  CCTACGTCAT AGACACAAGT ACATCAGGCA CTCACCGACT TTTTGAATGA CCTCTATGTT
  AGAGAGTGGG CAGAGGTGGA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322505795	CHEV_8_13284621	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224789490					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13334621 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
9530085L11Rik	RIKEN cDNA 9530085L11 gene			731 bp downstream
Dcun1d2	defective in cullin neddylation 1 domain containing 2			Intron
				Noncoding-Transcript-Variant
Gm25014	predicted gene, 25014			1407 bp upstream
Rr659902	regulatory region 659902			1204 bp distal