rs224796313 SNP Detail

Summary

• ID
  rs224796313
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:102335721 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTGTTAAAT GCATGAGAAT TCAATGTAAA
  TGTTTAGGCA TAGCTGATAG TAGAGGTGTT AATATCTTCA TCTAAGGCAG TGTGCATGTG
  TCCACCTGTT CATGCTTTGG TGTCAAAAGC ACTACTTAAA GCTACAGAAA ACCAAAAAAA
  M
  CCCCAaacaa caacaacaac aacaacaaca acaacaacaa caacaacaac aacaacCAGA
  CAAAACAGCA GATGAAAATT TGGAAGACAC TGGCAGTAGG AAAGCGAGGC AAAGAAAGAT
  AGAAATGATA AATCAAGATA AATCACAAAA                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322357786	CHEV_7_109835028	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224796313					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:102335721 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19528	CpG island 19528	460 bp proximal
Gm45527	predicted gene 45527	295 bp upstream
Rr652623	regulatory region 652623	127 bp proximal
Rr652624	regulatory region 652624	746 bp proximal
Trim68	tripartite motif-containing 68	within coordinates
Tssr73953	transcription start site region 73953	738 bp downstream