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rs224820938 SNP Detail
Summary
  • ID
    rs224820938
  • Variation Type
    SNP
  • Alleles
    A/G
Genome Location and Flanking Sequence
  • Location
    Chr19:21573892 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                TCTTATAAAG GACATTTAAC
    TGGAGCTGGC TTACAGGGTC AGAGGTTCAG TCTATTATTG TCAAGGCAAT AACATGATAG
    TGTCCAGGCA GGCATGGTGC AGGCAGAGCT GAGAGTTCTA TATCTTCATC TCAAGGCTAC
    TAGTGGAAGC TAGGGTGAGG GTCTTATGCC CACACCCACA GTGACACACC CACTCCAACA
    R
    GGCCACACCT CTAATAGTGC CACTCCCTGG GCCAAGCATA TACAAACCAT GACACTCCCT
    TTATGTAGGA AGGGCATGCA CTAAGCACCT TGTGCAGTGG GTACTCTTTT TACATGACCA
    GATTACGATA CTACTCAGGG CAGGGCACCT CACCAAGAGA GAAAAGAAAA AAAGCCGTTT
    TACTGTAGTG GTTCGAATGA                                            
    
    R = A/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
LG/J
SM/J
ss325752829 CHEV_19_21671018 CHEVERUD SCREENING_POP f SNP G A
SNP Consensus Information
SNP Consensus Type
LG/J
SM/J
rs224820938 SNP G A
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr19:21573892 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
1110059E24Rik RIKEN cDNA 1110059E24 gene 785 bp downstream
Gm38486 predicted gene, 38486 326 bp upstream
Gm59243 predicted gene, 59243 within coordinates
Rr364167 regulatory region 364167 1510 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory