rs224825880 SNP Detail

Summary

• ID
  rs224825880
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:35946789 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCATCTCTCC AGTCCCCCAA GGTTTAAACG TTAAGAATGG
  CAAAGGTACA TACTTTCTCA GAACAAATTG TTTTTTAAAA CAAATTGTAT GTGTGTGTAT
  T
  TTTATTTTAT ATGTATGCCT GCTCTGTCTG CATGTATGTC ACCCAGAAGA GGGTGTTGTA
  TTCTCTGAAA CTGGTTTCAA ACAGTTGACG GCTATCATG                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322587375	CHEV_8_36542689	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224825880					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:35946789 () rs orientation: forward

Symbol	Name	Function Class
Eri1	exoribonuclease 1	within coordinates
Rr662194	regulatory region 662194	99 bp distal
Rr662195	regulatory region 662195	196 bp distal
Rr662196	regulatory region 662196	101 bp distal
Rr662197	regulatory region 662197	39 bp proximal
Tssr80937	transcription start site region 80937	924 bp downstream