rs224872892 SNP Detail

Summary

• ID
  rs224872892
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:72907520 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    cccaaggca gtgcctgata tacaTTGTCT
  CTGGAACTca cacacacaca cacacacaca cacacacaGG GTCTTCTTGG TTTCTTGGTG
  CTATAATCCT TGCTCCTTGG TTGGGCTTTT GGCTGCCTAT GATGGAGGTT GCATTTGTTG
  K
  TGGTGGTGGT GGTAGGTTTT TTCCCCTTTC TTTCCTTTTT TTGTTTTGTT TTGCtttgct
  ttgtttcgag atacgtttct ctgtgtagcc ttggctgttc tggaactcgc tctatagtcc
  aggctggcct tgaacttgga gatctacctg                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323745729	CHEV_11_72830196	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224872892					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:72907520 () rs orientation: forward

Symbol	Name	Function Class
4732414G09Rik	RIKEN cDNA 4732414G09 gene	within coordinates
Cpgi3228	CpG island 3228	1801 bp proximal
P2rx1	purinergic receptor P2X, ligand-gated ion channel, 1	1494 bp downstream
Rr247151	regulatory region 247151	1480 bp proximal
Rr369285	regulatory region 369285	1300 bp downstream