rs224891658 SNP Detail

Summary

• ID
  rs224891658
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:43443429 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    gCAGAGTTC TTATTATTGT ATATACATCA
  GGAAATAAAA AAAACAGTGT TACATAACAG GGTAAAATCT CCAATGTAGA AGCTCATGAG
  TTCAAAGCCA ACCAAAAGCC CCAGCATCCC TGAAGCCAAG AGCGTGTACA TATGCACAAA
  R
  TAGGAATAGA CACAAGGGAA TGACCCTTAA TGGAATGAGG ATTCAAATGT CATAAATGAA
  GATCGGTTGA CATAAAGGTA CAAACTAGAG GAAAGCATTT CTAAGTTCAG ACTTATGTTA
  TTTAGGATAA CAAGATATAA CCAGAGCTAT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320267183	CHEV_2_43408937	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224891658					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:43443429 () rs orientation: forward

Symbol	Name	Function Class
Kynu	kynureninase	1912 bp upstream
Rr556278	regulatory region 556278	1171 bp proximal
Rr556279	regulatory region 556279	1620 bp proximal
Rr556280	regulatory region 556280	1948 bp proximal
Tssr17589	transcription start site region 17589	1904 bp upstream
Tssr17590	transcription start site region 17590	1928 bp upstream
Tssr17591	transcription start site region 17591	1945 bp upstream