rs224895544 SNP Detail

Summary

• ID
  rs224895544
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:121070764 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAACCATGC AGAGCAAACC
  AGTAAGCAGC ACCCATCCGT GGCCTCTACA TCAGTTCCTG CCGCCAGGTC CTTCTCCTAA
  GTCCTGTCCT GATTTTCTAC AGTGATCTGG AAGTGTTAAG CTAAATAAGT CCTTCCTTCC
  CCAGCTTGCT TTTGGTCATG ATATTTCATC ACAGCAATAG AAACCCTAAC TAAAGCAAGT
  Y
  GGTATCAAGA TGGTAGGGTA TAGTAGGGTA GAGCTATGAC AACCCTGACC ATGTTATTTT
  GGGGAAGATT ATGGAAGGAC TTTGGAACTT GAGGCTAGAA AAGCCAGAGT GCTCAGTACC
  TGGTGAGTGT ACTGTAGGAG CTTGGAAGAT AAGAATGTTA AAAGCAGAAC AGAAGATGGG
  GCCTAGGGGG GCGGAGATAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324851460	CHEV_14_121232574	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224895544					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:121070764 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6879	CpG island 6879	1201 bp distal
Rr287003	regulatory region 287003	1364 bp distal
Rr287004	regulatory region 287004	837 bp proximal
Rr390218	regulatory region 390218	965 bp downstream
Rr404289	regulatory region 404289	1252 bp downstream