rs224897475 SNP Detail

Summary

• ID
  rs224897475
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13264976 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAATAAAAAA TAAAAGCTCT
  TATTGTCATC ATAGAGTCAG CTAAACCATA GCCACAGCCA CCACTCAGCA GACTAACACA
  CAAGCGAGCA GTCCTTGGTG TGATCAGTGC TTTCTCATAA TGTTTAGAAA AGTACAAAGA
  CTTCCATTAA GAACTTTCAA ACTTAAGGCT GAAGAGATGG CTCAGTGGTT AAGAGCACTG
  K
  CTACTCTTCC AAAGGACCCA GGGGTTCAAT TCCAAGCATC CACATGGTAG TCTCAACTGT
  GTGTAATTCC AGTTACGGGG GTGGGAGGGC TGACATCCTC ACAGAGACAT CCATGCAGGT
  AGAACACCAA TGTTAATAAA ATAAAAGAAT AAAAAGGTGA AAAAAAGAGT TTTCACAATT
  AAAATATATC TATAGAAAGG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322505148	CHEV_8_13214976	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224897475					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13264976 () rs orientation: forward

Symbol	Name	Function Class
Gm63815	predicted gene, 63815	896 bp upstream
Rr368495	regulatory region 368495	1140 bp downstream
Rr368496	regulatory region 368496	803 bp downstream
Rr659886	regulatory region 659886	1471 bp distal
Rr659887	regulatory region 659887	1513 bp distal
Rr659888	regulatory region 659888	453 bp distal
Rr659889	regulatory region 659889	852 bp distal
Rr659890	regulatory region 659890	1495 bp proximal