rs224901328 SNP Detail

Summary

• ID
  rs224901328
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:77158393 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTAATTTTCT TAAAACCCCT TCCCTTGAGA TCCTTTGAAG
  GCTACTACTT TGACCCTGAA GGTTCAGAAA AAGTAATGAG GTTTTTTGTT TGTTTGATTG
  K
  TTTTTTTTTT TTTTTGTCTG TATCAATAGT TATTAGAGAA ACACAAACAA AGTGGCAATA
  GGCATAGTCA CCTCTGGTGA CAAAAATAAA AGTTCATAC                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325255223	CHEV_16_77361750	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs224901328					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:77158393 () rs orientation: forward

Symbol	Name	Function Class
D16Mit217	DNA Segment, Chr 16 Massachusetts Institute of Technology 217	79 bp distal
Mir99ahg	Mir99a and Mirlet7c-1 host gene (non-protein coding)	within coordinates
Tssr139060	transcription start site region 139060	13 bp upstream
Tssr139061	transcription start site region 139061	936 bp upstream