rs224901795 SNP Detail

Summary

• ID
  rs224901795
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:153471244 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTCTCTAAG TTGTCAGGGC
  TATGGACACA TGTTGGCCAA ACCTCCTTAT CATGAAATGC CTTACTTACC TCTTTGGGCT
  CAGTTAGGAA ATGGAAAAGC ACTTCTGTCA GGTCGGAGAA CTGCTGTAAA AGGGAAAAAC
  ACATAGCCTG AGCACCATTC TGTTTCCTGA TGCCCGCCGC CCAGTGTGCC CATCCCCCAG
  G
  GTGCCTACCC CATCCAATAT CTCCACCTAA CCCAGTGTGC CACATATCAC CCAGCTATAG
  GCTTTTGAGA GAGAAGAATC CTTTGAGAAT TTATACAGTG CGTCTTGACC ATGCCCACCC
  CTCCCCCCTT ATTTATTTGT TTAATTTGGG GGTGTATGGG GTAGTCAGAG AACAACCTTC
  AAGCGCTGGT TCCTCCCTTC                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BUB/BnJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	CE/J	FVB/NJ	KK/HlJ	LG/J	MA/MyJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	QSi3/Ianm	RIIIS/J	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J
ss356175499	MGP_WTSI_2_153455060	EVA_MGPV3	EVA_MGPV3	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BUB/BnJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	CE/J	FVB/NJ	KK/HlJ	LG/J	MA/MyJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	QSi3/Ianm	RIIIS/J	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J
rs224901795					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss356175499	MGP_WTSI_2_153455060	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:153471244 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Commd7	COMM domain containing 7			Intron
				Noncoding-Transcript-Variant
Rr567709	regulatory region 567709			1111 bp proximal