rs225001249 SNP Detail

Summary

• ID
  rs225001249
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:107651399 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAATAACCG AAAGCAGGTG
  TGTGTGTGCG CGTGTGTTCA CTGCAGCAGC ACGGGCAATG GACACAATAG AACCAGTGAT
  AGGGTCACAC CGTTATACGA ATGTGGAATA CATACGGAAT AGTCTGTGTC TTTACAATGG
  ATGGACTCCT GGAGCATTCA GTGGCACAGA AGAACCTTGA AGACATAGTG AAGCCCTCAG
  K
  CTCCAAAGGA ACAATAATCT ACTTCCTCCA ACAGTTGAAT TGACTGAGAC AGGAAATGCG
  GGTGGGTTGG GGGAGGGGGT GATGATTGCC AGGAGTTGGG GTGGGGATGC AAGCTACCAT
  TAGATGGGTG TGGATGATGG TGATGGTTTC ACAGCCATGC GGACGCAGTC AATGCCGTGG
  TTTTGGATTC ATTTCTGTTG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321251345	CHEV_4_107466807	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs225001249					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:107651399 () rs orientation: forward

Symbol	Name	Function Class
Gm69341	predicted gene, 69341	within coordinates
Lrp8os3	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor, opposite strand 3	within coordinates