rs225006776 SNP Detail

Summary

• ID
  rs225006776
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:79597762 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AAACTTAAA GCAACCCAGT TTACTGCCAG
  CCCTCTTCCT TCCTGTGAGA GAATACTATT TGACTAAAAA GCAGAATTTA GCAACTGTAC
  CTCTTAAGCC TCCTGCTGTG AGTTTTACTC CAATCTCTTG GCCCTGGAGA GACATCTTCT
  G
  GAATCTTTCA TTGTACAAAG AAATCCAGAT TCCTAAACTA ATCAAATCAG GTGAATGTTG
  AGTTTCATGG GATCCCTGCC CATTCAGAGA TTTTCAGCAG ATACTTCAGA AGTCTCTTTT
  AGTCCCCTTT CCAGTCACCA CTGTATAAAC                                 
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323760574	CHEV_11_79520438	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs225006776					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:79597762 () rs orientation: forward

Symbol	Name	Function Class
Cpgi3370	CpG island 3370	1842 bp distal
Gm11205	predicted gene 11205	1922 bp downstream