rs225019315 SNP Detail

Summary

• ID
  rs225019315
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:119007349 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACCCACCCC AAGGGTCATT
  TCCTGGGGCT ACTCCATCAC TCAGCTTCAG TTCATGGGCC CTGGTTCAGG TCCTCCTGCA
  GTGATGCCAC CTCCACAAGG TGACCAAGGC CATCCTGCAA TTTCCCATCT TATCAGCCCT
  GACCTTTGCT TGTCTTTGGA TCTTTGTTAA TCCCCTGTTC TGCCCACCTC TCTGAAATCT
  Y
  TTTCATGTAC TTCTCTGAGG GCCTCTGTGT GTGTCCCCCC CCAGCTCCCA GACGTCCACG
  GCCCCCTCCA TTTCCCATGA GACCCACCCG GAGGAGGCCT TGAAATGGAC TGCTCACCAG
  ATATTGCAGA TAAGGGGAAA CATGGGCATG CCGCCCAGCA GGCACAGCAG TCTCCAGTGG
  ACGACTTTGT AAGCCAGCCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323217939	CHEV_9_119087401	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs225019315					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:119007349 () rs orientation: forward

Symbol	Name	Function Class
Rr193313	regulatory region 193313	52 bp proximal
Rr211575	regulatory region 211575	962 bp proximal
Slc22a14	solute carrier family 22 (organic cation transporter), member 14	within coordinates