rs225032232 SNP Detail

Summary

• ID
  rs225032232
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:76801204 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CACTGGTTG CCTTGTGTGT GTGTGTATGC
  AAAATGCAAA TAGGAGCTAT CAAAGGCTGT GGGCACTGAA CGCTGACAAT GGTAGCCCAA
  AAGCTAGATT GTTATCGTTA GCAATCATAC TAAGTACAGA TCAGCTATCT GAACATAATA
  S
  GTTTTTCAAG ATTAATTTTC AATTAATTTG TTTTTCCCTA TTTTACCTCT TGGTGGCAGT
  GTTGCTTTAC AAATTCTTCA CACGGGGCCA TGTTTATCAG TGTATTCCGG CACTTGCTTA
  GGGTATTTAG TTTACATCAA TCATAAATAA                                 
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320356663	CHEV_2_76808917	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs225032232					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:76801204 () rs orientation: forward

Symbol	Name	Function Class
Rr559723	regulatory region 559723	1728 bp distal
Rr559724	regulatory region 559724	within coordinates
Rr559725	regulatory region 559725	42 bp proximal
Tssr24823	transcription start site region 24823	1673 bp upstream
Tssr24824	transcription start site region 24824	1634 bp upstream
Tssr24825	transcription start site region 24825	1179 bp upstream
Tssr24826	transcription start site region 24826	1139 bp upstream
Tssr24827	transcription start site region 24827	1118 bp upstream
Tssr24828	transcription start site region 24828	1035 bp upstream
Tssr24829	transcription start site region 24829	923 bp upstream
Ttn	titin	Intron