atgtcctgg aactcacttt gtagaccagg ctggcctcga actcagaaat ccacctgcct ctgcctccgg agtgctggga ttaaaggcgt gcgccatcac tcccggcttt acatggcttc tgaggacttg aactcatgtc ctcttccttg W gtggaaaaca ctttaaacac taagtgatct tgctagctcA GTGCTTATTG TTTTGTTCTG TTTTTTTTTT CCTCCAattg tatgtgcatg aacgtttcgt tttgcccgtc attgtgtagc tatacatatt ccgtacatgc agtgtccaag W = A/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | LG/J |
SM/J |
---|---|---|---|---|---|---|---|
ss320068148 | CHEV_1_154637315 | CHEVERUD | SCREENING_POP | f | SNP | T | A |
SNP Consensus Information | |||||||
SNP | Consensus Type | LG/J |
SM/J |
||||
rs225077404 | SNP | T | A |
Location: Chr1:152665936 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Rr420541 | regulatory region 420541 | 48 bp proximal | ||||||
Rr420542 | regulatory region 420542 | 151 bp proximal | ||||||
Rr420543 | regulatory region 420543 | 275 bp proximal | ||||||
Tssr9422 | transcription start site region 9422 | 1710 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/25/2025 MGI 6.24 |
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