rs225095747 SNP Detail

Summary

• ID
  rs225095747
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:110974675 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTATTTAA TTTTTTTTGA
  AGTATAATTT TCTCTCTCCC TTCCTTCCTT CCTTTTAAAT CTATTTTTGA GACTTGATCT
  CCTTTTGTGT TGTGCTGACT GGCTGGGAGC TCACTGTGTA GACATGGTTA ACCACACCCG
  GTAAAGTGAA CTTTTAATAT TCAGTCAGCA CACATTAATT AAAGATCTAT TATGTATGGA
  Y
  ACTGCTACAT TTAGAGGGTG TATATAGTTC TACCATAGAG CTCAGATTCA AAAGGGGAAA
  TAGGCACTGA AGGCCACATA ATGGATTCTT CCTCAAAGTT CAGATACTTA GCAGTTCCTT
  TTTGTCTTGA AAACTGGTTA TCTGTGTCTG CTATAGTCAC TGGGATTCTT AGAATCAAGG
  AAATATGTAA TGTGTGTATT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323195915	CHEV_9_111048111	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs225095747					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:110974675 () rs orientation: forward

Symbol	Name	Function Class
Lrrfip2	leucine rich repeat (in FLII) interacting protein 2	within coordinates
Rr687307	regulatory region 687307	568 bp distal
Tssr87483	transcription start site region 87483	1088 bp upstream