rs225098840 SNP Detail

Summary

• ID
  rs225098840
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:97953909 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCCTCGCCC AGTCTTTCCT
  CTGTGCCTGC CCAGCCCTGG TGTCTACTCT TCTTATTATT AGGATACTAA TACTATTGGT
  TAATGGCCTC ACACTTATTT GCTGCCCCAT AATTACCTCT TTTAAAGGTC CTGTCTCCAA
  ATATAGTTTA ATTCTGAGCT AGGGCTTCAA CATAGACATT TTGGTGGGCA GTATTTAGTC
  Y
  ATAACATTTT TCCCTTCACT ATGCAATCGG TGAAGGGTTA GGAGTGAGAG GTAAGAGTAT
  ATATTTTCTG CTTAAGATCA GAAATTGGAG ATTTCAACTT TATTATCTAC ACACCCAGCA
  ATGCCTTAGT GGCCAGCAGT ACCAATTGCA TTAGCTCCTT GAGGCCCCAT TTTCTTTCCT
  CTAAAATATG CATGTAGCAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324132335	CHEV_12_99225860	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs225098840					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:97953909 () rs orientation: forward

Symbol	Name	Function Class
Rr387674	regulatory region 387674	578 bp upstream