rs225121977 SNP Detail

Summary

• ID
  rs225121977
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:107649703 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCTCAAAGC CTCATGGGAC
  CTGAGAGCTC ATCTCCCAAG ACCAACCCAA GAAGAAACAG CTAGACACTA GCAGGGACTT
  CATGCATGGA AGAAAGCTCC TAGGATACTT ACTGCATGTT GTTGTATTGA GGAGATTTCC
  ACAGATGAGG GAGACTGGAG ATGGGTAAGC AATGAACACT CAGAAAATGG AGCAAGAAAT
  K
  AATACTAAAT GTAATGGTTC TTCCTGGGTG TCAACTTGAC TACATCTGAA ATGAACTACA
  ATCCAGAATT GGAGGGCTCA CCTGTGATCC GGAAGACACA AGTTTCTGAC CTGGATCTTG
  GCATGGAGAT CTTGAGGCAC AGTAGCCATG GAAGGTTTAG GCCCAGGTGA GGGTACACAC
  CTTTAATCCC AGGAGACTAA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321251328	CHEV_4_107465111	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs225121977					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:107649703 () rs orientation: forward

Symbol	Name	Function Class
Gm69341	predicted gene, 69341	within coordinates
Lrp8os3	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor, opposite strand 3	643 bp downstream