rs225136778 SNP Detail

Summary

• ID
  rs225136778
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:142620865 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GACTT AGCCACTGAT GGTTAACCAC
  R
  CTCTTGCCAT CCCTGCAGCA AGATT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322473970	CHEV_7_150253033	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs225136778					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:142620865 () rs orientation: forward

Symbol	Name	Function Class
Cd81	CD81 antigen	within coordinates
Cpgi19972	CpG island 19972	1759 bp proximal
Tssr2467	transcription start site region 2467	1819 bp downstream
Tssr70275	transcription start site region 70275	1365 bp downstream
Tssr70276	transcription start site region 70276	1334 bp downstream
Tssr70277	transcription start site region 70277	1179 bp downstream
Tssr70278	transcription start site region 70278	389 bp downstream
Tssr70279	transcription start site region 70279	237 bp upstream
Tssr70280	transcription start site region 70280	273 bp upstream
Tssr70281	transcription start site region 70281	407 bp upstream