rs225155662 SNP Detail

Summary

• ID
  rs225155662
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:118055267 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTATTATCAT TATTAGTATT
  TTAAATCTGA AAGACTTTCT CACTGACCTG GACCTCCTTA CATTGGCAGG CCAGTGATCT
  CCAGGGACCC TCTCGTCCCT GTCTACCCAG CCTGGGGTTA CTAGCTCTAC CAACTTACTT
  GGCTTTTTTC CCCCACTGCC CCTGTAGATT CTGAAAATTG AACTCGGACC CCCAATGCTC
  S
  CAGACCTAGA GCTTTGCTGA CCGAGCCATC CCATCAGACA CTTTTATTTA TTTAAAAAAG
  GGACGCAACC GAAATTGACC ACCGTTAGAG CACACTCCCT GTGTCTGCCA CCTCAGCCCA
  CAGCCCAGAA GCCCTCTGGG GTCTCCTTCC AATTACTACC TTTCTTCTTC TCCCTTGATT
  TCTCCTGACC ACGGCCTGGT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322840381	CHEV_8_119852428	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs225155662					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:118055267 () rs orientation: forward

Symbol	Name	Function Class
Cmip	c-Maf inducing protein	within coordinates
Tssr79599	transcription start site region 79599	346 bp upstream
Tssr79600	transcription start site region 79600	1868 bp upstream