rs225160958 SNP Detail

Summary

• ID
  rs225160958
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13262318 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAACAGCTTC CATTACAGAT
  GGTTGTGAGC CACCATGTGG TTGCTGGGAA TTGAACTCAG GACCTCTGGA AGAGCAGTCA
  GTGCTCTTAA CTGCTGAGCC ATCTCTCCAG CCCTCTTTAT TTTTCTTTTA TGAGTGTTTT
  GATGCATATA CATGCACCAC AAGCATGAAG TACCAAAGGA GGCCAGAGGA ATGCATCGGC
  W
  CCCCTGGGAA TGGAGTTACA GACAGTTGTA AGGCACTATA TGCTGGGAAC TGAGCCCAGG
  TCCTCTACAA GAGCAGCAAA TGCTCTTGAC CACAGAACTG TGTCTTAAGT ACCATGCCTT
  TTAATTCTGG TAAATCCTCA CATTCTCCTA GCAACATAGA AATATGACCT ATATACAATA
  AAACTCACCC ACTTGATGTT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322505122	CHEV_8_13212318	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs225160958					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13262318 () rs orientation: forward

Symbol	Name	Function Class
Gm63815	predicted gene, 63815	within coordinates
Rr368495	regulatory region 368495	1149 bp upstream
Rr368496	regulatory region 368496	1654 bp upstream
Rr659886	regulatory region 659886	687 bp proximal
Rr659887	regulatory region 659887	1124 bp proximal
Rr659888	regulatory region 659888	1715 bp proximal
Rr659889	regulatory region 659889	1765 bp proximal