AACCTGACT TTTAAATGGC AAAAATGCGC TCAAAAGTTA ACCTTGCTTT TTTTTTTTTT CCCCTACACC TATTTTGGCA TTGGTTGTCT GTTTTTTATT GAAAATGAAG AATTTCTCAA AGACTAGTTT GAAATTCGTT TTCTTACTTA Y CCTTCAGAAA TAAGGATATG AAATCCAAAG CTAGGGTAGC AGTTGTAATT CTCCGTGAAG TTTATTGGGT AAAGCAAGCA CATAGTCTTA TTTCATTTTT CATAGTCGTA TCTTTTATTA GTGTGCATGC TATGGCTTAC CCAGAAATTG Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | LG/J |
SM/J |
---|---|---|---|---|---|---|---|
ss324945881 | CHEV_15_44260521 | CHEVERUD | SCREENING_POP | f | SNP | T | C |
SNP Consensus Information | |||||||
SNP | Consensus Type | LG/J |
SM/J |
||||
rs225161536 | SNP | T | C |
Location: Chr15:44292371 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Cpgi7073 | CpG island 7073 | 377 bp distal | ||||||
Eny2 | ENY2 transcription and export complex 2 subunit | within coordinates | ||||||
Nudcd1 | NudC domain containing 1 | 668 bp upstream | ||||||
Rr311712 | regulatory region 311712 | within coordinates | ||||||
Rr404372 | regulatory region 404372 | 886 bp downstream | ||||||
Tssr131224 | transcription start site region 131224 | 1562 bp downstream | ||||||
Tssr131225 | transcription start site region 131225 | 801 bp downstream | ||||||
Tssr134195 | transcription start site region 134195 | 1162 bp upstream | ||||||
Tssr134196 | transcription start site region 134196 | 1063 bp upstream | ||||||
Tssr134197 | transcription start site region 134197 | 638 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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