rs225223318 SNP Detail

Summary

• ID
  rs225223318
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:116242596 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGTTTAGCT GGTTGCTCTA
  ATGAACACAT TTAGATGGGT GGATAAAGTA GTCAGGGGTT TGGAAGCTTG CCCTTGCACA
  TGTTAGGTGA GCATCCTACG ACTGAGCTAC ATCGCCAGTC CTATGTCCTA TCTGTTGATC
  ATTTGGCATC AATAATTCTT CATTGTGTAT GTGGGAGGGG GCTGTCCTGC ATACCGTAGG
  R
  TGGCTAGTGC CATCCCCGAC GTACAGCCAT CATATCACCT CTTTGCAACT GAAACAAAAC
  ATCCTCAGAC ATTGCAGAGG GTCTCAGACC AGCAGGAGCA GTCCATTTTG AGAATCTCTA
  TAGAAAACAG TTAGTAGCTG CTTTGAAGAA CATGTCAACT TTGTCATATC AGTCTTCCTA
  ATTGCCCAGT TAGTGATTTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320895039	CHEV_3_116151865	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs225223318					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:116242596 () rs orientation: forward

Symbol	Name	Function Class
Gm22361	predicted gene, 22361	383 bp upstream
Gm66091	predicted gene, 66091	within coordinates