rs225229528 SNP Detail

Summary

• ID
  rs225229528
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:78714615 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGTGGCAAA GATCTGTATG
  CGGGATTTTT TTCCCCCCAT TTTTGCCTTG GTGATCTCTT TTGGCACATC CACCTGTCAC
  TTTGTGCCCC TCTCCCTGTG TTCTGGCAGA ATTTGAGTCA TGCAAATTGC AAACTGGTAA
  ATAGCAACTT TGCATATTTT GAATAGGAGG GAACATCAAG GTAGAACGCA TCCTGTATGC
  T
  CAGAGAAATG GGAGCCGGGG AGGCCTGAGA GCCAGGGCAG GTCCAAGGGC CTAAGTATAT
  TCTTCAAAGT ATTTTATCAT ACTCATTACA GCCATTGTAT ATTTATGAAT TAATTTGAAT
  TATTTACATG GTCAACATTT GAGACAATAA CCCGAAATAA TCAAAGCATG CAAATGCATC
  GTTTCTCTTT GAAATGTGGA                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323757660	CHEV_11_78637291	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs225229528					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:78714615 () rs orientation: forward

Symbol	Name	Function Class
D11Bhm78	DNA segment, Chr 11, Boehm 78	223 bp distal
D11Bhm79	DNA segment, Chr 11, Boehm 79	699 bp proximal
Gm23219	predicted gene, 23219	598 bp upstream