rs225284800 SNP Detail

Summary

• ID
  rs225284800
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:89837094 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GCTCCAGAT ATCTCCCCTA TCTGAAGTCT
  GTCCCACTAT GTGAGCCCCA TCCTCCCTCC TACTATAAGT GCCTTGGGAT CCGGTTCCTG
  AACCTGATCC TGCCTGCCTT CCACCTCAAC TGTGGGGAGG GAAGGACTCT GGGCAGCACA
  Y
  GTGAAGAGTG AAGCTGCCTG CTGGTTTGCT GGAGAGCAGC TCTGCACAGG GTTCTGCCCA
  GCTACATTGC TTTCGAGAGG AAGTGGATGG CCACTTTAGA ACCTGATGTC AATTTAGTGA
  TTTAATTTAC TGGTGCTCAG TAAAAGGATC                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323066206	CHEV_9_89849879	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs225284800					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:89837094 () rs orientation: forward

Symbol	Name	Function Class
Cpgi22129	CpG island 22129	897 bp distal
Rasgrf1	RAS protein-specific guanine nucleotide-releasing factor 1	within coordinates