rs225306174 SNP Detail

Summary

• ID
  rs225306174
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:12501953 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGAAGCTTC CCTTCCCTCC
  CACCCTTTCA TCCGGTCTCC CCTGTATTAG CACCCTTTTC TCACTGCTCT GACCAAGTAC
  CTTACAAAGA CAATGTGAGG AAGGAGACTC TATTTTGGCT CACATAAGAC TTTCATGGTA
  GGGAAACCAC AGTGGTGGGG GCATGAGCTG CGGGCCTTGG TGCATCCTCA GTCAGGAAGC
  K
  GAGAGAGATG GACAGTGGGG TGCAGTGGCC TCCTCATCTC TGTTCACTTT AGGACCCTGG
  ATAGCAGCAC TAAGTTCCCT CGGGGTGGGT CTTCCTTTCT ATGTTAATCC TGCCTGAAGA
  CGCCAAAGTG TGCAGTGCTC ACAAAGCTCC GCAGTCATGA AGGCCCTGCT GGCTCCCTGA
  CAGGCTGCTC CCCACCTCTG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322498719	CHEV_8_12451953	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs225306174					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:12501953 () rs orientation: forward

Symbol	Name	Function Class
Gm56835	predicted gene, 56835	within coordinates
Rr381713	regulatory region 381713	1978 bp upstream