rs225363233 SNP Detail

Summary

• ID
  rs225363233
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:125221806 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTGTTTTGT ATCAAGATAA
  AGTTTAGAAA CAGTATATTT CTGAGAGATT TAGAAGTTAG TCAATGAATG ATATAAGTAG
  GGAAACTTAT TTATTTGCAA GATTATAGAA TTTGATCCTT TGAAACACAG TCACAAAGTT
  AACTCCTGTT TCAAAGTTGT TTGCCTTTGT TGTGTTGGGG ATTTATATAA ACACCATAAC
  R
  TTCTTGCAAA AAATTCAAAG ACAGAAATAA GCAATATGTT GGTGACCACA CTCCTAAATC
  TCTCTGAAGA GAATGGAGTC ATATATGAAA ATAGAAAAAT AAACTTTGCT AAGGATCCCA
  TTTTTTAATG TTAAAACTGA AGATCTGATG TGCTCTTTCT CTCTATAAGA AATAATGGCA
  TTTGAATTGG AATCTTATTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320936367	CHEV_3_125131075	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs225363233					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:125221806 () rs orientation: forward

Symbol	Name	Function Class
Ndst4	N-deacetylase/N-sulfotransferase (heparin glucosaminyl) 4	Intron
Rr584610	regulatory region 584610	1959 bp distal