rs225385847 SNP Detail

Summary

• ID
  rs225385847
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:152493067 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GGCACTTCA TCAACTCCCA CAGTAGTGAA
  AGATGTGCAT TTTACAGATG AGAGTGAAGA CTCCAACCTC ATGCAAAGTC ACAGGCAACA
  AATAATATTA AAGACAAAAG AAGAAATGTC TGTTTCTTgt caggcatgat ggtggcgcat
  K
  cctttaatcc cagcactcag gaggcagggg caggcagatc tctgtgagtt cgaggccagc
  ctggtctaaa aagtgagttc ctgggcagcc agggctttta cagaaaaaac aaagaagaaa
  aaGAAAAAAA GAAAAAGAAA TGTCTAAGTT                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320562880	CHEV_2_152476883	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs225385847					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:152493067 () rs orientation: forward

Symbol	Name	Function Class
1700030C14Rik	RIKEN cDNA 1700030C14 gene	1736 bp downstream
D2Ertd691e	DNA segment, Chr 2, ERATO Doi 691, expressed	31 bp distal
Rr374088	regulatory region 374088	950 bp upstream
Rr567410	regulatory region 567410	1705 bp proximal