rs225420068 SNP Detail

Summary

• ID
  rs225420068
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:125232413 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGTGTGAAC ATGTAGGGGT
  GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTGTCTTGGG TTGTGTGTTA GCACATCCAT
  GTTGGGATTT GGTCTGTTGC TATGTATTGT AATGCTAAAT TCTCTACCCA AAGTTCTAGG
  CCTACGAGTG AATTCTCATG TTTACAAACT TGCTGTGTAA ACCTTGTTCC TTAATTTAAT
  T
  CCATTGGTTA AATAAAATTG GCTGCAACCA ATTACTGGAG GGATTAGAGG TAGGGGGCTT
  TTGAGTTACC TGTTTGGAGA TGGAGAAGGA GAGAGGAGAG ACCAAGAGGA GAAGGAGGAA
  GGAGAGGAGA GGAGAGGAGA GGAGAGGAGA GGAGAGGAGA GGAGAGGAGA GGAGAGGAGA
  GGCTGCCGTG AGGGGAGAGG                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322448958	CHEV_7_132776755	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs225420068					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:125232413 () rs orientation: forward

Symbol	Name	Function Class
D7Mit101	DNA segment, Chr 7, Massachusetts Institute of Technology 101	114 bp distal
Il21r	interleukin 21 receptor	within coordinates
Tssr68993	transcription start site region 68993	1155 bp upstream