rs225487038 SNP Detail

Summary

• ID
  rs225487038
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:152386370 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CCCATAATG GGGTGGGAAG GGCAAGTGAC
  TGGCATTTCT TTCAAAGCTT TGTGTTTCCG AGATGGAGAC ATGTCAGGAG TGTCATGATG
  TTACTCTTGC CCTGGGGACA CACCGAGGGG AGGCGATGAA TGTAATCTGC CTTAAGTGCT
  C
  GTATGTGCCT AAGTGCTTTA GAGAGGAAAG ATTTTTCATA CCTTTTTAGA TAATGGGTAT
  TTTCTACATT GTGCCCTGGT ACTTGTGCTT GCCTGCGTGT GTGAGGGGCT AGGTGCTTGC
  ACGCATGTGT GGAAGATAAG TCTTACCTGC                                 
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321434087	CHEV_4_151676022	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs225487038					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152386370 () rs orientation: forward

Symbol	Name	Function Class
Gm70210	predicted gene, 70210	1374 bp downstream
Icmt	isoprenylcysteine carboxyl methyltransferase	within coordinates
Rr605836	regulatory region 605836	1318 bp proximal