rs225494581 SNP Detail

Summary

• ID
  rs225494581
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:142328309 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACACACCTT AAACCCCAAA
  CAGTGTAGGC AAAATAAGTT TGTAGAAGGA AGCAGCCATG TTTGAAAGTG ACATCTAACT
  CAGGGACAGA CAAAGTGGCA AATCAAAGAA ATATTTGACT GAATGTGTTA CGCCCAAATT
  TCATAAGACT GGCACAGGAA AGAGAAGCTA TTTAAGAACA GCTCAGAAAG AGAGAGGCAG
  Y
  CAGGATTCAG TGGAATGAGT GCAGTGCAGT GGAGTTGAGT GCAGGTCAGC AGAGGCAGTG
  GAAGTCAAAG GATATGAAGG GGACAGAAAA TTAGAACAAA TTGCCAGAGT TAGTTTGAGG
  CCAAGCAGAG CAACTGAGTG AAAAGCTGAG AGAAGCCAGA GTGGATCAGT CAGCTTGGAG
  AGAAGTTTGA GCCAGAGCAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320531576	CHEV_2_142312125	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs225494581					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:142328309 () rs orientation: forward

Symbol	Name	Function Class
Rr566216	regulatory region 566216	385 bp distal