rs225526243 SNP Detail

Summary

• ID
  rs225526243
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:73190028 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACAGTTCTG AGAGCAAATG
  ATTGCTGAGG CCTCCAGATA ATGGAGGTCT GGTGTGTGAG GTACTGATGA AAAGTTTCAG
  ACCAATGGGG CCATTTAATA TTTTGAATTA AGAATCTGTG GTTCTGGGCA GCTGGGGCTG
  AAGAATCAGC TGTGATTAAC AAGAGACCAG GACCACTGAG TGAAACCTTT GCTTTCCTGG
  G
  ACAACTGATG TTGGCCAACT GGGTCTGAGA AATGATCTGC GGTTAAGAAG AGACCAGAAT
  CCCTGAAGTT AAATCTTCTG GTAAGTGTTT CCTCAGGACC AGCACACAGA AGCTGTGGCC
  CAGAGGTCAT CAAGTCTGGA CTTGGCATTC ATTCACCAGT GAATGAATGA ACATGGTGAT
  GTGTAAAGTC GTCCAGGTGC                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320344961	CHEV_2_73197741	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs225526243					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:73190028 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Gm13703	predicted gene 13703			within coordinates
Gpr155	G protein-coupled receptor 155			Intron
				Noncoding-Transcript-Variant
Rr373357	regulatory region 373357			within coordinates
Rr559133	regulatory region 559133			171 bp distal
Rr559134	regulatory region 559134			within coordinates
Rr559135	regulatory region 559135			946 bp proximal