rs225532628 SNP Detail

Summary

• ID
  rs225532628
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:126388210 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGCTTTACA GCCAGTGATG
  AGGTAGGTTT TGAACCTCCG TACCCCCAAC AGCCTCCATC TGCTGCTGAT GCCCTTCACT
  GGCTACCACT GGCAAACATC ACCATGTGAG ACACAGCACA TTTTCCCCCC ACAGAGACTC
  CTATGAGTCT TAAAAGAGGG TCTTTGGGGG GAGGGGGAGG ACTCTCCAGG ATTTCTTGGC
  R
  TATACCTCTA CCAAACGCTC TCACTTCCTG CTGCACAGCT CCTCTCCAAT TTGCTTGGGC
  GGCCAAACAT CTTGCTTCTG TGTCTAGATG GTAGAGCCTG GCGTTACCTT CTTGAATGTC
  AGTGGGAACC TGGAACTGAC AGACAAAGGT CAGTGGGCTC GAGGAAGGTT CATTCACTTG
  TCACCCTATG TAAAACCCAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322860911	CHEV_8_128185371	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs225532628					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:126388210 () rs orientation: forward

Symbol	Name	Function Class
D8Ertd620e	DNA segment, Chr 8, ERATO Doi 620, expressed	73 bp proximal
Gm30871	predicted gene, 30871	within coordinates
Rr180111	regulatory region 180111	991 bp proximal
Rr183380	regulatory region 183380	643 bp distal