rs225544847 SNP Detail

Summary

• ID
  rs225544847
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:39370464 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTGAGGCTC TTGAGTCTGT TGGGAATTGC
  ACCCCTGCCA CTACTGAGAG AGACAAAGGT GGTGCTTTTA ATATTGGAAT GCATGCTGGG
  CTTTGACACT TGCACTTCTT TGGAACAAAG GAGATCTCCT TCAGTGTAGG GAGACCAAGT
  K
  TAGGAGACCC ACCAAGGAGA CAGAGCTGTG ACAGGATGTA GGGGGCGGGG TTACTCATCC
  AGTGAGGATA GAGAGGGAAT GCAGAAAACG GTTCAAAACA CAGGCCTGGT TAAACCTCAT
  GGGCATAGGA GTATACTGCC TTCCCAGAGT                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320228537	CHEV_2_39335972	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs225544847					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:39370464 () rs orientation: forward

Symbol	Name	Function Class
D2Mit368	DNA segment, Chr 2, Massachusetts Institute of Technology 368	1134 bp proximal
Rr373076	regulatory region 373076	466 bp downstream