rs225596645 SNP Detail

Summary

• ID
  rs225596645
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:49105213 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGTTGACAG TTCACTGCAT TGATGTAAAA
  AGAATTTTCA CATACCATAA AAACCAAAAT AACTTTTATA TTACCTTTTC CTATTATTAT
  GTGTATAACC AACATACAGC TTACGTTGAA TACTTTTATA ATGTGGTCAA TTTATAGAAT
  W
  GTCTTTTAAT ATGGACAGCA CTAAAAAACC ACATGCTAAT TCTTTACAAG TTCTTGCCAA
  TCTTTTTTTT TTACCATTTT ATAACTGCAT AAATGTATAG AAGATGCTTT GACCTAATCA
  Accctctatt atctctcctc caatccatgt                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324031061	CHEV_12_50159417	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs225596645					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:49105213 () rs orientation: forward

Symbol	Name	Function Class
Rr263627	regulatory region 263627	1029 bp distal