rs225610333 SNP Detail

Summary

• ID
  rs225610333
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:86162581 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TCCTATTCT CAGATCCTGC AGTAGTAACA
  GGAAGACTCA GTAAATCACA CCAGAAGTTG GGAAGCAGAA TCTGTTTTGA AAACACTAga
  tgatgatgat gatgatgatg atgatgacga cgacgacgac gacgacgacg acgacgacga
  Y
  gatgataatg atgataatga tgatTATTCA Attttgctgt ggtaacactt aagatctacc
  ctcataacaa attgtccaca ctcaagattc taagtagcca agggtgatgt tttaggttga
  atggccataa gtaatatcat cctgaatagg                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323373791	CHEV_10_85789462	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs225610333					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:86162581 () rs orientation: forward

Symbol	Name	Function Class
Gm57766	predicted gene, 57766	within coordinates
Rr217189	regulatory region 217189	781 bp distal
Rr217190	regulatory region 217190	1820 bp proximal
Rr220711	regulatory region 220711	781 bp distal
Syn3	synapsin III	within coordinates
Timp3	tissue inhibitor of metalloproteinase 3	within coordinates