rs225618736 SNP Detail

Summary

• ID
  rs225618736
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:43943862 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCACC CCCTCAGCTG GATTTCAGCC
  Y
  CTTGTGGACC CCTTTGTCAC TCCTG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322940029	CHEV_9_43840648	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs225618736					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:43943862 () rs orientation: forward

Symbol	Name	Function Class
Gm39323	predicted gene, 39323	within coordinates
Tssr84579	transcription start site region 84579	384 bp downstream
Tssr84580	transcription start site region 84580	370 bp downstream
Tssr84581	transcription start site region 84581	316 bp downstream
Tssr89098	transcription start site region 89098	1425 bp downstream
Tssr89099	transcription start site region 89099	1491 bp downstream