rs225663415 SNP Detail

Summary

• ID
  rs225663415
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:109759976 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AATACTTTG AGCTAACACA GAATCTCAGC
  AGCCAGAACA TCTAGGTTCA AAGGATGGCT CCAACTCTTA AATTCATACT AACTTTGGGG
  TCTTGGGAAG TTCCTTGTGA TCTCTGTGTT CACCTAGTTT TTCAATGTCT CTATTTGTTG
  Y
  GAGTATTATT ATATAAATTG ATAGATGGAA ATCATAAAGG CTGTTATTTC ATAAGTAATA
  TTCTTGCATT AGTTACTCTT GTCTTAGTTT ACTCCTTGAG CAGCTCTGTG ATAGATGTTG
  CTGATTAAAT GCTAGAGATT TACCTCTTGA                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320870671	CHEV_3_109655578	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs225663415					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:109759976 () rs orientation: forward

Symbol	Name	Function Class
Ntng1	netrin G1	within coordinates
Rr65057	regulatory region 65057	425 bp proximal