rs225696914 SNP Detail

Summary

• ID
  rs225696914
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:100097296 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    taaatataa ttaattaata aataataGTT
  TCTAAACTTG GTCAAATGTA GTGCCATCTG GCAAACATTT TCCTTTCAGT AGAAAGAAAC
  TGGACTCCCT TGCCAAACAT GGTGATCTGA CTCTGCGCAT ATGCGCTTTT AAAATGCTCA
  Y
  GTCATGGTTT ATGGGTTGTT CATGGTTGTT CCTTTCCATA TGGGCCTTGC TAGGATTGGC
  ACCCGGTTGC CTGCGATGCT AACGGGACTT CTCACACAAA GGCATCGTTT CATTAATTAT
  TAAGTATTCA TTAAGCCCTT GCTAACATAG                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320848249	CHEV_3_99993903	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs225696914					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:100097296 () rs orientation: forward

Symbol	Name	Function Class
Gdap2	ganglioside-induced differentiation-associated-protein 2	within coordinates
Rr64421	regulatory region 64421	within coordinates
Rr69692	regulatory region 69692	within coordinates
Rr82369	regulatory region 82369	139 bp distal