rs225744248 SNP Detail

Summary

• ID
  rs225744248
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:126260351 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGACTCATG ACTCCAGCCA
  CATATGTAGC AGAGGATGGC CTTATCTGGC ATCAATGGGA GGGGAGGTCC TTGGTCCTGT
  AAAGGCTCGA TGTCCCAGCT TAGGGGAATG CCAGGGCAGT GAGCAGGGAG TGGGTGGGTG
  GGTGGGGGAT CTCCTTCATA GAAACACAGG GGTTGGGGGG GGAAATGGGA TGGGATAGGG
  K
  ATTTGCAGAG GAGAAACTGG GAAGGGGGAA AACATTTGAG ATGTAAATAA AATAACCAAA
  TATATTTAAA AATAACAATT ATTAAAACAA TTTCACTGAA CATTTTGTAG TTAGGTGGGG
  ATTTCCTGGG AGGATTGCAG CCCTTCCGAG CCTCTCTAGG AACTTTAGAG TCCTTGGCTT
  CATTCAGCCC ATCAGCAAAC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320945455	CHEV_3_126169620	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs225744248					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:126260351 () rs orientation: forward

Symbol	Name	Function Class
Gm17225	predicted gene 17225	within coordinates
Gm46823	predicted gene, 46823	1645 bp upstream
Rr375709	regulatory region 375709	1680 bp downstream