rs225829524 SNP Detail

Summary

• ID
  rs225829524
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:190732141 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACCATCTGT AATGGGGTCT
  GATGCCCTCT GCTGGTGTGC AGGTGTACAT ACAGAACTCA CATACATTAA ACAAACAAGA
  AAATAAATCT TAGCAGAGTG CTGAATACTT ACCCAGCCGG CTTTCTCTTG TTTGTGCAGC
  CCAGGACCAT CGGCCAAGGA ATGCTGACAC CCATATATTT AAAATGGTCT TCCCTTCCAT
  M
  TCAGTTAACC TGATCAAGAT AACCCTTCAT AGGTATCTCC AGATGTTTGT CTCTTTGGTG
  ATTGTAGTGT AGAATCTGTC AGGTTAACAC TCAACATAAC TTAATGAGCA GAGAGATCAT
  GGCAAGCAGA GCATGAGGCA GCTGATCACA CTGCATCCAC AGCCAGGAAG CAGGGGAATA
  GACATGCTGA CATTCAGCTC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320194534	CHEV_1_192823823	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs225829524					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:190732141 () rs orientation: forward

Symbol	Name	Function Class
Gm8407	predicted gene 8407	1481 bp downstream
Gm37095	predicted gene, 37095	650 bp downstream
Gm70616	predicted gene, 70616	within coordinates