rs225852069 SNP Detail

Summary

• ID
  rs225852069
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:125233317 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAACCCCAGC TCTGGTGGCT
  CCAGGCTATG CAGCCTGGAG AAGCCACTTC TGAATTCTAT GCTGACTTTA CTTGCCTGGA
  CATTAGGAAT GACGTAGGTA CCCTGGATCA GCTCTATACA GTCTGCAGCC CCATTCTGCT
  TCCTGTCTTT TGTGGCTTCT AGGATCCAGG TGCATACTCT GGGGTGCATA CTCCAGGTGT
  A
  TGTGTGTGTG TGTGTGTATA CATATATATA TATATATATA TATATATATA TATATATATA
  TATATACACC AGCCTACACT ACACCCACAC ACCCACAGCC TGGGAACCAG TGGGGCATCC
  TCCCACCAAG AGTACTCAGC AGGTTTCCAG GCTGTGACAC CAGAAGCAGC CCCACCAACC
  AAGTTGGGTT TTCGTTTGTT                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322448964	CHEV_7_132777659	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs225852069					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:125233317 () rs orientation: forward

Symbol	Name	Function Class
D7Mit101	DNA segment, Chr 7, Massachusetts Institute of Technology 101	1018 bp distal
Il21r	interleukin 21 receptor	575 bp downstream
Tssr68993	transcription start site region 68993	251 bp upstream