rs225964495 SNP Detail

Summary

• ID
  rs225964495
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:161803391 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    gaggaggaa gagaagggag gggaggagga
  aggggaggag gaggaagaag agggaggagg gaggagagga ggaaaaaggg gagggagggg
  aggagaagga gggagggaag agaggaggag gaggaagagg aggaggagga ggaggaagag
  R
  aggaggagga ggaggaAGCA GTTTTGTCTA TTTGCCCAGA TAGAGTTGGT AGCTGGTATA
  GTTTGGATCT TACCTGTCAG TCAAAGACTC ACATGCCTGA TCTTTTAGGG CAGTGCTAGA
  ACCTTTGGGG AACTAAAGGT GTGGAAGGAA                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320082234	CHEV_1_163905953	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs225964495					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:161803391 () rs orientation: forward

Symbol	Name	Function Class
4930558K02Rik	RIKEN cDNA 4930558K02 gene	Intron
Gm38304	predicted gene, 38304	within coordinates
Rr396470	regulatory region 396470	621 bp upstream
Rr421879	regulatory region 421879	102 bp proximal
Rr421880	regulatory region 421880	712 bp proximal
Rr421881	regulatory region 421881	778 bp proximal