rs225997503 SNP Detail

Summary

• ID
  rs225997503
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:125869627 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATGGA AGCAGACAGG CAGACAGAGC
  K
  CTGAAGAGGT AGCTGAGAGT TCTAT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322450378	CHEV_7_133413969	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs225997503					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:125869627 () rs orientation: forward

Symbol	Name	Function Class
Cpgi19689	CpG island 19689	1262 bp proximal
Rr368426	regulatory region 368426	1293 bp upstream
Rr381444	regulatory region 381444	within coordinates
Rr655453	regulatory region 655453	1674 bp proximal
Sbk1	SH3-binding kinase 1	within coordinates
Tssr69002	transcription start site region 69002	1958 bp upstream
Tssr69003	transcription start site region 69003	1973 bp upstream
Tssr69004	transcription start site region 69004	1989 bp upstream