rs225997956 SNP Detail

Summary

• ID
  rs225997956
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:97747273 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ACCCTACAG CAGCCTCCCC ACTTATGTTT
  CCACAACAGT AGATCTCCAA GCCTCACAGC CTCCCTCTAC CATGTGGATG CAACACTTCC
  TTCTACCACA GTCAAGGCTG TGTGCCTCCA CATTGATCCT GGGTCCTTAG TGAGCCGTGC
  R
  GTAAGGCAGC TAATCAGAGG AACATTTAAG AGAGAAAAAG AAAATGAAAC CTTTCGATGA
  CTTCAGATTT ATATTTCCTT ATCTAAGGTC GTGTTCTGAA CGAAAGTTAA GATGGCCATG
  TCCACTCATT CCCTTTTATC TTTCAAGTTT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323123544	CHEV_9_97765639	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs225997956					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:97747273 () rs orientation: forward

Symbol	Name	Function Class
Clstn2	calsyntenin 2	within coordinates
Rr198247	regulatory region 198247	1273 bp distal
Rr205510	regulatory region 205510	1313 bp distal