rs226023083 SNP Detail

Summary

• ID
  rs226023083
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:34308091 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACCAAAATA GGATGGAAAA
  CCATGAGCAC TCAAAAGACA TTTGTTCTCA TTCATTCATT CATTCATTCA TTCATTTGAG
  AAGATAGTGC CTGACTCACA GACTGCCCAC TGACCCATGC CCCACTCTCT ACCCAGTGGT
  GCTTCCCTGT TGTAGAGCTA AGAACACATG TACACACAAA TCCATGTTCT TTCAGACTGC
  R
  GCTGCAGGGG CATCTTCTCT TCCTCCTCTT ATTTTATGAC TCTGTGTATA GCCCGCAACA
  CAGAGTGTCA ATGGGGGAAA GTATACTTAC CAGAGAATTT TGTGCCCACT CTTTATTTAT
  TCTTGATCTA GGGGGGCACC CTGATGTCAA TTTAGCTCAC TGTGGAGTGC TCTGAACATT
  AATGTTCTGT TGGCTGACAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320701291	CHEV_3_34152864	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs226023083					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:34308091 () rs orientation: forward

Symbol	Name	Function Class
Gm52623	predicted gene, 52623	476 bp downstream
Rr80429	regulatory region 80429	292 bp distal